| 2005 | Prairies | Mary Halvorson And Jessica Pavone | | 1 |
| 2007 | On and Off | Mary Halvorson & Jessica Pavone | | 1 |
| 2008 | Calling All Portraits | Mary Halvorson, Jessica Pavone, Devin Hoff, Ches Smith | | 1 |
| 2009 | Crackleknob | Mary Halvorson | | 1 |
| 2009 | Thin Air | Mary Halvorson & Jessica Pavone | | 1 |
| 2011 | Electric Fruit | Weasel Walter - Mary Halvorson - Peter Evans | | 2 |
| 2011 | Departure of Reason | Mary Halvorson and Jessica Pavone | 2 | 2 |
| 2012 | Camino Cielo Echo | Tom Rainey Trio with Mary Halvorson and Ingrid Laubrock | | 2 |
| 2012 | Opulence | Mary Halvorson and Weasel Walter | | 1 |
| 2012 | Mechanical Malfunction | Weasel Walter, Mary Halvorson & Peter Evans | | 1 |
| 2013 | Sifter | Mary Halvorson, Kirk Knuffke & Matt Wilson | | 1 |
| 2013 | Super Eight | Stephan Crump, Secret Keeper, Mary Halvorson | | 1 |
| 2014 | Reverse Blue | Mary Halvorson | | 1 |
| 2015 | Emerge | Stephan Crump, Secret Keeper, Mary Halvorson | | 1 |
| 2015 | Meltframe | Mary Halvorson | 4 | 2 |
| 2016 | Mary Halvorson & Noël Akchoté | Mary Halvorson & Noël Akchoté | | 1 |
| 2016 | Illegal Crowns | Taylor Ho Bynum, Mary Halvorson, Benoît Delbecq & Tomas Fujiwara | | 1 |
| 2016 | The Out Louds | FUJIWARA / Ben Goldberg / Mary Halvorson | | 1 |
| 2017 | Crop Circles | Sylvie Courvoisier / Mary Halvorson | | 1 |
| 2017 | BANGS | Jason Moran, Mary Halvorson & Ron Miles | | 1 |
| 2017 | Err Guitar | Elliott Sharp with Mary Halvorson & Marc Ribot | | 1 |
| 2018 | Code Girl | Mary Halvorson | | 4 |
| 2018 | The Maid with the Flaxen Hair—A Tribute to Johnny Smith | Mary Halvorson with Bill Frisell | 4 | 2 |
| 2018 | Seed Triangular | Robbie Lee and Mary Halvorson | | 1 |
| 2018 | Traversing Orbits | Mary Halvorson – Joe Morris | | 1 |
| 2018 | Contemporary Chaos Practices / Two Works for Orchestra With Soloists | Ingrid Laubrock; Mary Halvorson, Kris Davis, Nate Wooley, Ingrid Laubrock | | 2 |
| 2019 | Combobulated | Tom Rainey, Ingrid Laubrock & Mary Halvorson | | 1 |
| 2019 | The No-Nosed Puppet | Illegal Crowns, Mary Halvorson, Taylor Ho Bynum, Tomas Fujiwara, Benoît Delbecq | | 1 |
| 2019 | A Tangle of Stars | Mary Halvorson & John Dieterich | | 1 |
| 2019 | Even Better | Michael Formanek, Mary Halvorson & Tim Berne | | 1 |
| 2021 | Searching for the Disappeared Hour | Sylvie Courvoisier & Mary Halvorson | | 2 |
| 2022 | Amaryllis | Mary Halvorson | 2 | 2 |
| 2022 | Amaryllis & Belladonna | Mary Halvorson | | 1 |
| 2022 | Belladonna | Mary Halvorson | 3 | 2 |
| 2022 | Strings & Things | Jamaaladeen Tacuma & Mary Halvorson | | 1 |
| 2024 | Cloudward | Mary Halvorson | | 3 |
| 2024 | 3+3 | Tomeka Reid Quartet feat. Tomeka Reid, Mary Halvorson, Tomas Fujiwara & Jason Roebke | 3 | 2 |
| 2025 | Bone Bells | Sylvie Courvoisier & Mary Halvorson | | 1 |
| 2025 | About Ghosts | Mary Halvorson | | 2 |
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